Browse of TCMCG016C15561 protein

CDS

Accession Number	TCMCG016C15561
gbkey	CDS
Protein Id	OMO74684.1
Location	join(64821..64935,65044..66622,66880..67003,67122..67415,67532..67734,68042..68330)
Organism	Corchorus capsularis
locus_tag	CCACVL1_16536

Protein

Length	867aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source	AWWV01011079.1
Definition	Mechanosensitive ion channel MscS [Corchorus capsularis]
Locus_tag	CCACVL1_16536

EGGNOG-MAPPER Annotation

COG_category	M
Description	mechanosensitive ion channel
KEGG_TC	1.A.23.4
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko02000        [VIEW IN KEGG]
KEGG_ko	ko:K22048        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005773        [VIEW IN EMBL-EBI] GO:0005774        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006811        [VIEW IN EMBL-EBI] GO:0006820        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008381        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0015267        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0022803        [VIEW IN EMBL-EBI] GO:0022836        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0031090        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044437        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0098588        [VIEW IN EMBL-EBI] GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCTATTGATTCGGCTGCCCGGAAAGATATCGTCTTGAATGTTGACGACAGAAGCAATGACAGTAACGTTCCTGTCGCCGCCGCTCCTTCTGCGGCCGCTGCAACCAGTGGAGACGGTGATAGAGAAAGGGAAAGTTTTGATTTCAGGCATAGCAAACAAGGAGACATGGAAGATCCACCATCAAAACTGATTGGTCAGTTTTTGCATAAACAGCAAGCTTCAGGTGAGATTTCGTTAGACATGGATTTGGAGATGGATGAACTTCAACATGAGCCACTTCATTATGGTCGTGGCGGCGTTTTGCCACCGGTTGCTGAAACGCCTTCACCTTCACCATCAGCAGCTGCTATGCCCAGGGTTTCATTTGAAAACAACCCTGTAAGGAGAAGGCAAAGTAAAGGGTCACCATCTCAAGGGAAAGAAGAGAGTAGGGACTCTAAGGAGAGTGATGGCGTTGTGAAGTGTAGTTCAAATTCTTCTTTCAAAAGAAGTGAAGGTGGTTCTTTCCAAAGGAAGTCAAGTTTGTTAGTAACAAAGACAAAATCCAGGTTGATGGACCCTCCTACACCAGAAAAGGGTGAGCCAAGGTCGGCAAAAGCTGGAGTAGGGAAGTCTGGACAAATGATGAGATCTGGGTTTCTTGGGAAAGGTAACGAGGAAGAAGAGGATGATCCATTGCTTGAAGAGGATTTGCCTGATGAGTATAAGAAAGATAAGTTAAGTGTTTGGGTTTTACTTGAATGGTTAAGTTTGATTTTGATAATTGCTGCTTTAGTTTGTAGTCTTACAATTCCTTACCTGAGACAGAAACGTTTGTGGAAACTTATGTTGTGGAAATGGGAAGTCTTGGTTTTGGTTTTGATATGTGGTAGATTGGTTTCAGGGTGGATTATAAGGATAATTGTGTTTTTCATAGAGAGGAATTTCCTTTTGAGGAAAAGGGTATTGTATTTTGTTTATGGAGTGAGGAAAGCTGTTCAGAATTGTTTGTGGCTAGGACTGGTTCTGATTGCTTGGCATTACTTATTTGATAAGAAAGTTCAGAGGGAAACTAAGAGTGAATTCCTTAGGTATGTGACCAAAGTTTTGGTTTGTCTTGTGGTGGGTGTGATGTTGTGGCTAGTGAAGACCCTTTTGGTGAAGGTGCTGGCATCCTCTTTTCATGTCAGTACTTATTTTGATAGAATCCAGGATTCATTGTTCAACCAATATATAATTGAGACTCTTTCTGGTCCACCTTTGGTTGAAATTCAAAGGGCTGAGGAGGAGGAGGAGAGAATTGCAAATGAAGTTATGAACCTACAGAAAGCCGGTGCTAAGATTCCTCCGGGGCTCAAGACATCCACCCTTTCATCACCACATTCAGCTAAGTTGATAGGGAGTGGACGAATCCAGAAAAGCCCTCGAGGAAAAAGCCCTATGCTTTCACGTGTTCTTTCTTCTGAGAAGGGAGAGAAGGATGATAAGGGTATAACAATTGATCATTTGCACAAATTGAATCATAAAAATATCTCTGCTTGGAATATGAAAAGGTTAATGAACATTATCCGCCATGGAGCTCTTTCCACTTTAGATGAGCAGATACAAGATTCAACTCATGAAGATGAGTCTGCTACACAAATTAGAAGTGAATATGAGGCAAAAGTTGCAGCAAGGAAAATCTTTCAGAATGTTGCTCAGCCAGGATCTAGGTACATCTACTTGGAGGACATTGAGCGTTTTCTGCCAGAAGATGAGGCTATGAAGACAATGAGTTTGTTTGAAGGAGCGTCTGAAAGCAGGAGAATCAGCAAGAAGGCCCTCAAGAATTGGGTGGTCAATGCTTTTAGAGAACGAAGAGCTCTTGCCTTGACACTGAATGATACCAAAACAGCTGTGAACAGACTTCATAGGATGGTGAATGTTCTTGTAGGCATCGTCATATTGGTCATTTGGCTTCTCATACTTGAGATTGCTTCCAGCAAAGTTCTTGTTGTAATTAGCTCTCAACTGCTCCTGGTCGCATTCATATTTGGGAATACCTGCAAGACAGTTTTTGAAGCCATTATTTTCTTGTTTGTTATGCACCCATTTGATGTGGGTGACAGATGTGAAATTGATGGAGTTCAGATGGTCGTGGAGGAAATGAACATCTTGACTACTGTTTTCCTAAGATTCGACAACCAGAAGATTATAATCCCAAACAGTGTCCTCGCTACTAAGGCCATAAATAACTTCTATCGTAGCCCTGACATGGGAGATGCAGTTGAATTCTGTATCCATGTGAAAACTCCCGCGGAAAAGATTGGTCTGATGAAGCAGAGGATATTGAGTTACATCGAGCACAAGAGTGACCATTGGTACCCCGCTCCAATGATCGTATTAAAGGAATTTGAAGAATTGAACAGAGTGAGAATAGCAATATGGCTGACACAGAGAATGAATTTCCAAGACATGGGAGAGAGGTGGGCAAGAAGGGCTCTCTTGGTTGAAGAGTTGGTTAAGATTTTCAACGACTTGGATATTAAGTACCGCCTATATCCCATTGATGTCAACGTCTGTGGTTTGCCTCCGGTGGGATCTGACCGCCTTCCTCCTAATTGGACTGGAACTGCCAGCTGA

Protein:   MAIDSAARKDIVLNVDDRSNDSNVPVAAAPSAAAATSGDGDRERESFDFRHSKQGDMEDPPSKLIGQFLHKQQASGEISLDMDLEMDELQHEPLHYGRGGVLPPVAETPSPSPSAAAMPRVSFENNPVRRRQSKGSPSQGKEESRDSKESDGVVKCSSNSSFKRSEGGSFQRKSSLLVTKTKSRLMDPPTPEKGEPRSAKAGVGKSGQMMRSGFLGKGNEEEEDDPLLEEDLPDEYKKDKLSVWVLLEWLSLILIIAALVCSLTIPYLRQKRLWKLMLWKWEVLVLVLICGRLVSGWIIRIIVFFIERNFLLRKRVLYFVYGVRKAVQNCLWLGLVLIAWHYLFDKKVQRETKSEFLRYVTKVLVCLVVGVMLWLVKTLLVKVLASSFHVSTYFDRIQDSLFNQYIIETLSGPPLVEIQRAEEEEERIANEVMNLQKAGAKIPPGLKTSTLSSPHSAKLIGSGRIQKSPRGKSPMLSRVLSSEKGEKDDKGITIDHLHKLNHKNISAWNMKRLMNIIRHGALSTLDEQIQDSTHEDESATQIRSEYEAKVAARKIFQNVAQPGSRYIYLEDIERFLPEDEAMKTMSLFEGASESRRISKKALKNWVVNAFRERRALALTLNDTKTAVNRLHRMVNVLVGIVILVIWLLILEIASSKVLVVISSQLLLVAFIFGNTCKTVFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTVFLRFDNQKIIIPNSVLATKAINNFYRSPDMGDAVEFCIHVKTPAEKIGLMKQRILSYIEHKSDHWYPAPMIVLKEFEELNRVRIAIWLTQRMNFQDMGERWARRALLVEELVKIFNDLDIKYRLYPIDVNVCGLPPVGSDRLPPNWTGTAS